Home Remedies to Get Rid of SIBO

Small Intestinal Bacterial Overgrowth (SIBO) is characterized by diminished levels of ‘good’ bacteria’ and excessive growth of ‘bad’ bacteria in the gut (dysbiosis) that leads to impaired digestive health. SIBO is linked with several gut-related and systemic conditions including irritable bowel syndrome (IBS), Celiac disease, gastroesophageal reflux disease, autoimmune disorders, cystic fibrosis etc.

In modern medicine, SIBO is generally treated by antibiotic therapy with probiotics as adjuvant (complimentary) therapy, which cannot completely treat/cure the underlying cause(s). In most of the cases, antibiotic therapy may not be useful and recurrence is not uncommon.

Nutrition therapists generally prefer home remedies for SIBO due to its efficacy and safety. Non-medical SIBO management aims to limit fermentation potential (FP) rather than limiting all types of carbohydrates to prevent recurrence. This approach employs hard-to-digest carbs to feed and boost beneficial bacteria to treat SIBO and associated symptoms.

Resistant Starch

Resistant starch (RS) is one of the important types of starch that resists digestion, feed symbiotic bacteria and aid recovery from SIBO symptoms. RS possess the ability to flush the bad bacteria from the small intestine to the large intestine. But you should start from very low doses of RS and gradually increase overtime. Unmodified, raw potato starch is the best example of resistant starch.

Some of the benefits of resistant starch are:

  • Feed healthy (good) bacteria
  • Promotes butyrate production
  • Immune boosting
  • Metabolic recovery and even weight loss

Fermentable carbohydrates with poor absorption potential have higher chance of bacterial fermentation that lead to aggravation or recurrence of SIBO symptoms. Some forms of RS (RS2) are less fermentable and hence pose slight risk of SIBO worsening.

Does resistant starch cause any side effects?

Yes, too much of anything is not good!

Consumption of too much of resistant starch can exacerbate SIBO symptoms in certain individuals.

Some of the reported gastrointestinal side effects of resistant starch are diarrhea, flatulence, stomach aches, general weakness, acid reflux, bloating or fullness, abdominal cramps and even intestinal blockage. Although, both studies are conducted in healthy individuals, these symptoms are same in SIBO patients but of varying degrees.


To treat dysbiosis, diets supplemented with resistant starch, high fiber and probiotics are often preferred. You may think about feeding the gut microbiome with plenty of fermentable carbohydrates. But in reality, this approach can backfire in cases like small intestine overgrowth of certain bacterial species including Clostridia and Firmicutes. These organisms thrive well in high fermentation burden that can contribute to bacterial overgrowth. You can aid your gut microbiome to recover by avoiding antibiotics and feeding the bacteria and also by reducing stress.

Adding certain probiotics such as Bifido infantis, lactic acid bacteria, bifidobacterium bifidus and other non-soil based probiotics can be helpful to alleviate SIBO. Our gut has evolved overtime to colonize it with beneficial bacterial species. Some of the species remain transient, while most of the species are really helpful for microbiome recovery in SIBO patients. Even fecal-oral transfer of certain good bacteria from house mates can also be helpful for recovery.

According to a placebo-controlled clinical trial study, Lactobacillus treatment has improved diarrhea symptoms with remarkable reduction in breath hydrogen levels that sustained over 21 days, even after stopping the treatment. These benefits can reduce the associated symptoms of SIBO.

An open-labeled study to investigate the benefits of Lactobacillus casei (65 billion bacteria/day) on SIBO patients has reported negative breath hydrogen test results in 64% of probiotics-treated patients without notable improvement in GI symptoms.

A pilot study published in World Journal of Gastroenterology has reported notable symptomatic relief in SIBO patients after probiotics therapy. The patients were randomized to receive either metronidazole (antibiotic) or a probiotic supplement that contains beneficial microbes including Bifidobacterium brevis, Lactobacillus casei, Streptococcus fecalis and Lactobacillus plantarum. When compared to the antibiotic-treated patients, statistically significant (remarkable) symptomatic response was observed in probiotics-treated patients.

Taken together, probiotics really possess treatment benefits against SIBO and associated symptoms. However, more double-blinded, long-term studies are needed to scientifically validate the therapeutic/adjuvant benefits of probiotics in clinical care setting.

Diet plan that keep SIBO at bay

Among the SIBO management tips, diet plan stands first to prevent the recurrence or aggravation of SIBO. Recently, Fast Tract Diet has gained steam among SIBO sufferers, which has been designed to limit the carbohydrate intake and to curb bacterial overgrowth. The dietary preferences of Fast Tract Diet includes gut-friendly foods to aide your digestion and to reduce SIBO symptoms.

Nutritionists usually consider the Fast Tract Diet as a newer way to treat SIBO, as it limits all difficult-to-digest carbohydrates by using mathematically-derived fermentation potential values for each food. This technique can help you to choose specific carb type without seeking professional help.

Fast Tract Diet is not akin to strict low-carb diet; but it contains too many difficult-to-digest carbohydrates and thus reduces fermentation in the intestine and SIBO symptoms.

Fast Tract Diet recommends limiting high amylose-containing rice, high amylose-containing root vegetables, sucrose and high fructose sources, excess lactose and sugar alcohols.

This diet plan includes:

  • FODMAP diet
  • Low starch diet
  • Low carb diet
  • Paleo diet
  • Elemental diet
  • GAPS or specific carbohydrate diet


FODMAP refers to Fermentable Oligo, DI and Monosaccharides and Polyols. The diet approach aims to limit sugar-derived alcohols, fructose, lactose, fructans, galactans and lactose.

According to human clinical trials, FODMAP has been shown to be effective in management of functional gut symptoms including IBS, which is linked with SIBO. FODMAP diet plan allows resistant starch and beneficial fibers that are widely present in cereals, bananas, sweet potatoes, corn, gluten-free pasta etc. In normal individuals, FODMAP diet has useful prebiotic effect.

Some of the FODMAP-containing vegetables are mushroom, Brussels sprouts, artichoke, asparagus, cabbage, celery, garlic, sweet corn, sweet potato, okra and onion. Fruits such as mango, watermelon, peaches, apples, apricots, pears, lychee, blackberries, cherries, grapes, plums and pears are FODMAP-containing fruits.

FODMAP-based diet is particularly useful for any individuals suffering from SIBO and IBS and chronic stress.

Paleo Diet

Modern Paleo diets are based on available food types that are consumed during human evolution. Some of the food items that are included are nuts, seeds, green veggies, fish, meat, eggs and herbs. Wild rice, sweet potatoes, cassava, yams are limited while most grains, beans, pulses and dairy products are not allowed.

Paleo diet limit or eliminates difficult-to-digest carb that are linked with SIBO. Tuber and root vegetables which contains significant amount of resistant starch are allowed, as it can reduce SIBO symptoms.

However, certain rice varieties like jasmine rice have zero fermentation potential; however, it is not suitable for diabetics and hypertension patients and these patients should avoid eating jasmine rice too much.

Elemental Diet

This diet plan consists of ‘predigested food’ that contains fatty acids, micronutrients and water instead of carbohydrates, proteins, fats and amino acids. Elemental diets are mostly available as commercial and ready-to-use dietary products that can be ingested either by mouth or via a tube (enteral). The diets are designed for full absorption in a variety of gut-related problems that are linked with SIBO.

Some of the limitations of this diet plan are: Need for proper medical supervision, high cost and ingestion of predigested foods which are really unappealing.

Specific Carbohydrate Diet

This diet plan limits all disaccharides as well as starch and grains but not simple sugars like glucose.

Although, the diet plan looks great, specific carbohydrate diets such as honey, fruits and fruit juices that are allowed in this plan can contribute to SIBO. This diet allows consumption of both amylose and amylopectin, which has high fermentation potential that can worsen SIBO symptoms.

Low-Starch Diet

Reducing starch in diet may improve the IBS and SIBO symptoms. The aim of this dietary approach is to limit all forms of starch including maltose, sucrose and lactose. In this way, the diet may limit intestinal overgrowth of certain bacteria including Klebsiella pneumoniea.

This diet plan unnecessarily limits all forms of starch without limiting fructose, which is considered as the disadvantage of this diet plan.

Low Carb Diet

Although, anecdotal evidences have shown that low-carb diet can improve reflux disease and IBS, which are associated with SIBO. On the downside, low-carb or ketogenic diets don’t restrict sugar alcohols and fiber, which can potentially worsen SIBO symptoms. Most of the dieters fail to stick with the diet due to underlying medical problems, which is a simple reason for failure of this diet.

Stress Reduction

As you know, stress is one of the culprits that cause intestinal dysbiosis or SIBO. Modern Western lifestyle and work pressure can cause negative impact on gut microbiome. Certain dietary patterns, antibiotics and other underlying medical conditions can worsen the problem. If you want to reduce or eliminate the symptoms of SIBO, you should identify the triggering factors, particularly stress.

Stress management is really important to improve digestion. Some of the reliable ways to manage stress are meditation, yoga, mindfulness, exercise and deep breathing. These non-medical approaches can be helpful to build a calm mind, strong and metabolically-active digestive system.

These mind-body techniques can activate the parasympathetic nervous system and suppress stress hormones including cortisol and normalize serotonin levels. The latter is implicated in gut motility via gut-brain axis.

Improve your MMC for Healthy Gut

Impaired migrating motor complex (MMC) has been regarded as a common underlying cause of SIBO. In normal individuals, MMC acts as bowel cleansing waves that normally get activated every 90 minutes in the small intestine. MMC activation is important to prevent colonization of bad bacteria and accumulation of debris in the gut. But MMC activation requires fasting state.

Studies have shown that remarkably decreased (70%) level of MMC in SIBO patients. In these patients, MMC will get worse, if accompanied by stress and/or too much snacking. MMC activation can be improved by meal spacing with water or unsweetened herbal tea, which would be ideal for MMC activation which aid the intestine to flush out the excess bacteria. Mini-fast or meal spacing effectively can rest the digestive system, increase energy levels and stimulates healthy appetite to enjoy your eating.

You can improve MMC by your own by spacing your meal every 3-5 hours; avoid snaking often and with better stress management. By this way, you can promote optimal and regular MMC activation and prevent recurrence of SIBO symptoms.

Herbal Aides

Instead of opting medical treatment, you can easily control SIBO symptoms from returning by adopting several non-medical home remedies. Use of herbs and essential oils has been proved to be beneficial in management of SIBO. Some of herbs like ginger and green tea are being used in day-to-day life.

  1. Green Tea

Green Tea

Research evidences have shown that drinking green tea can increase the numbers of bifidobacteria and lactobacilli, decrease pH in the stools to aid growth of good bacteria, decrease the numbers of bad bacteria including enterobacteria, clostridia and bacterioides, and decrease levels of certain chemicals including cresol, ammonia, sulfide, skatol and indole, which facilitates intestinal fermentation and growth of bad bacteria.

The recommended level of chemicals present green tea is 300 mg catechins/day, which is roughly equivalent to 5-6 cups of green tea/day.

  1. Essential oils of Coriander seed, Peppermint, Tea tree and Lemon Balm

A recent study has shown that essential oils of tea tree, lemon balm, coriander seed and peppermint possesses potent inhibiting effects against E. coli, which is one of the causatives of SIBO. Antibacterial effects of these oils are comparatively significant than pine oil.

You don’t have to worry about the safety of these essential oils. In the listing of food additive status, the United Food and Drugs Administration (USFDA) has notified that essential oils of peppermint, coriander seeds and lemon balm are generally recognized (GRAS) as safe to ingest. [http://www.fda.gov/Food/IngredientsPackagingLabeling/GRAS/] [accessed 01/18/2016]

Surprisingly, in controlled laboratory conditions, the essential oils of coriander seed and peppermint have demonstrated significant antibacterial activity against E. coli DH5α, when compared to Rifaximin – a preferable choice of antibiotic to treat SIBO. Based on the available medical evidences, these three essential oils can be employed either singly or as a combined formulation to kill colonized bad bacteria in the small intestine, instead of inhibiting the growth.

These three essential oils contain various bioactive compounds including geraniol, pinene, camphor, cymene, linalool etc that are highly effective against bacteria that cause IBS and associated problems such as SIBO.

As reported in one case study, treatment with peppermint oil tablets (enteric-coated) for 20 days could attenuate SIBO symptoms with 32% reduction in methane elimination and hydrogen reduction in lactulose breath test. These results suggest improvement in SIBO/IBS symptoms such as altered bowel habits, pain, eructation and bloating.

Additional studies have suggested that peppermint oil capsules administration have significantly reduced bacterial colonies/numbers in the small intestine which indicates improvement in gastrointestinal transit time. However, no studies are available to show that peppermint oil tablets can completely reverse SIBO symptoms.

Interestingly, peppermint can positively act on serotonin receptors and lemon balm can modulate the gut-brain axis and reduces stress.

  1. Dark Cocoa

A clinical trial study on healthy humans has shown that people who consumed either low or high cocoa flavonol (500 mg of cocoa flavanol or 14 g cocoa powder/day) for 4 weeks resulted in significant increased in fecal lactobacilli and bifidobacteria. Notably, decreased level of clostridia is also reported in the study volunteers. The results are suggestive of restoration of altered gut microbiome.

  1. Pomegranate Husk

Research evidences have pointed the antibacterial properties of pomegranate husk against Campylobacter jejuni, Shigella species, E. coli, Vibrio species, Pseudomonas aeruginosa, Staphylococcus aureus, Klebsiella pneumoniae, Proteus species, Yersinia enterocolitica and Listeria monocytogenes. Most of these organisms are believed to be the causative of SIBO and dysbiosis.

  1. Ginger 



Ginger, a culinary herb in kitchen, is a natural prokinetic that can increase digestive motility. You can also avail ginger root supplement capsules from natural health stores. The recommended dose of ginger root capsules is 1100 mg, twice daily. A cup of ginger tea can slightly improve your sleep. Anecdotal evidences have pointed out that ginger significantly improved gut motility problems, reduce SIBO relapses while improve MMC.

  1. Garlic

Garlic Cloves

Recent studies have confirmed that fresh garlic is way effective than dry garlic for SIBO management.

Garlic is a good antimicrobial herb; however, it is not useful if the small intestine is overpopulated with good bacteria such as Lactobacillus. Despite this limitation, garlic exerts potent antimicrobial activity against various gram-negative bacteria including methogenic bacteria which is linked with SIBO.

To achieve maximum benefits, it is best to crush or chop fresh or dried garlic cloves and add a teaspoon of honey for taste. Avoid consuming garlic supplements, particularly encapsulated garlic products which are generally ineffective.

In single doses, you can consume > 2.75 g of fresh garlic or > 8.5 g of dried garlic to treat SIBO.

Some of the other essential oils such as Carum carvi, Lavandula angustijolia, and Trachyspermum copticum have possess antimicrobial properties against Candida albicans, Bacteroides fragilis and Clostridium species) which are believed to be the causatives of SIBO. However, none of these essential oils are adverse to beneficial bacteria, which is noteworthy.

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